HL_7OLD_092
3D structure
- PDB id
- 7OLD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GAUCAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 7OLD|1|2|U|1002
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OLD_092 not in the Motif Atlas
- Homologous match to HL_4V88_208
- Geometric discrepancy: 0.1712
- The information below is about HL_4V88_208
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.2
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 14
Unit IDs
7OLD|1|2|G|995
7OLD|1|2|A|996
7OLD|1|2|U|997
7OLD|1|2|C|998
7OLD|1|2|A|999
7OLD|1|2|G|1000
7OLD|1|2|A|1001
7OLD|1|2|U|1002
7OLD|1|2|A|1003
7OLD|1|2|C|1004
7OLD|1|2|C|1005
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain 5
- Transfer RNA; tRNA
- Chain B
- HABP4_PAI-RBP1 domain-containing protein
- Chain SO
- 40S ribosomal protein S14-like protein
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