HL_7OLD_096
3D structure
- PDB id
- 7OLD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GAC(B8N)CAACAC
- Length
- 10 nucleotides
- Bulged bases
- 7OLD|1|2|A|1193
- QA status
- Modified nucleotides: B8N
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OLD_096 not in the Motif Atlas
- Homologous match to HL_8P9A_215
- Geometric discrepancy: 0.1384
- The information below is about HL_8P9A_215
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_97521.1
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
7OLD|1|2|G|1185
7OLD|1|2|A|1186
7OLD|1|2|C|1187
7OLD|1|2|B8N|1188
7OLD|1|2|C|1189
7OLD|1|2|A|1190
7OLD|1|2|A|1191
7OLD|1|2|C|1192
7OLD|1|2|A|1193
7OLD|1|2|C|1194
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain 5
- Transfer RNA; tRNA
- Chain B
- HABP4_PAI-RBP1 domain-containing protein
- Chain SQ
- 40S ribosomal protein S16-like protein
- Chain SU
- 40S ribosomal protein S20-like protein
- Chain Sf
- 40S ribosomal protein S27a-like protein
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