HL_7OLD_103
3D structure
- PDB id
- 7OLD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- AUUGCAAUUAUU
- Length
- 12 nucleotides
- Bulged bases
- 7OLD|1|2|A|1555
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OLD_103 not in the Motif Atlas
- Homologous match to HL_4V88_219
- Geometric discrepancy: 0.1568
- The information below is about HL_4V88_219
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_03273.1
- Basepair signature
- cWW-F-F-tWH-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
7OLD|1|2|A|1546
7OLD|1|2|U|1547
7OLD|1|2|U|1548
7OLD|1|2|G|1549
7OLD|1|2|C|1550
7OLD|1|2|A|1551
7OLD|1|2|A|1552
7OLD|1|2|U|1553
7OLD|1|2|U|1554
7OLD|1|2|A|1555
7OLD|1|2|U|1556
7OLD|1|2|U|1557
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain B
- HABP4_PAI-RBP1 domain-containing protein
- Chain SP
- 40S ribosomal protein s15-like protein
- Chain SS
- Putative ribosomal protein
- Chain ST
- 40S ribosomal protein S19-like protein
- Chain Sd
- Ribosomal protein uS14
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