HL_7OLD_113
3D structure
- PDB id
- 7OLD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GCGUAACGGCUAUCAC
- Length
- 16 nucleotides
- Bulged bases
- 7OLD|1|5|C|16, 7OLD|1|5|G|17, 7OLD|1|5|G|18, 7OLD|1|5|U|20
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OLD_113 not in the Motif Atlas
- Homologous match to HL_4V9I_038
- Geometric discrepancy: 0.5706
- The information below is about HL_4V9I_038
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_68572.1
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
7OLD|1|5|G|10
7OLD|1|5|C|11
7OLD|1|5|G|12
7OLD|1|5|U|13
7OLD|1|5|A|14
7OLD|1|5|A|15
7OLD|1|5|C|16
7OLD|1|5|G|17
7OLD|1|5|G|18
7OLD|1|5|C|19
7OLD|1|5|U|20
7OLD|1|5|A|21
7OLD|1|5|U|22
7OLD|1|5|C|23
7OLD|1|5|A|24
7OLD|1|5|C|25
Current chains
- Chain 5
- pe/E tRNA
Nearby chains
- Chain SB
- 40S ribosomal protein S1
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