HL_7OOD_036

3D structure

PDB id

7OOD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mycoplasma pneumoniae 50S subunit of ribosomes in chloramphenicol-treated cells

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

AUAAUUGGAUUU

Length

12 nucleotides

Bulged bases

7OOD|1|3|U|1481, 7OOD|1|3|U|1482, 7OOD|1|3|U|1486

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OOD|1|3|A|1477
7OOD|1|3|U|1478
7OOD|1|3|A|1479
7OOD|1|3|A|1480
7OOD|1|3|U|1481
7OOD|1|3|U|1482
7OOD|1|3|G|1483
7OOD|1|3|G|1484
7OOD|1|3|A|1485
7OOD|1|3|U|1486
7OOD|1|3|U|1487
7OOD|1|3|U|1488

Current chains

Chain 3

23S ribosomal RNA

Nearby chains

Chain m

50S ribosomal protein L17