RNA 3D Hub //

7OOD Hairpin, Internal, and multi-helix Junction Loop Motifs

Download loops

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_7OOD_0011/3/61:70tRNA anticodon loop
geometric
HL_6JXM_002
HL_97725.1
HL_7OOD_0021/3/89:97No text annotation
geometric
HL_5J7L_135
NA
HL_7OOD_0031/3/124:129No text annotation
geometric
HL_5J7L_143
NA
HL_7OOD_0041/3/139:144GNRA
geometric
HL_5J7L_152
NA
HL_7OOD_0051/3/161:171No text annotation
geometric
HL_5J7L_138
NA
HL_7OOD_0061/3/198:205No text annotation
geometric
HL_5J7L_139
NA
HL_7OOD_0071/3/229:234No text annotation
geometric
HL_4C9D_002
HL_36488.1
HL_7OOD_0081/3/250:256No text annotation
geometric
HL_7RQB_008
NA
HL_7OOD_0091/3/281:288No text annotation
geometric
HL_5NFV_001
HL_69752.4
HL_7OOD_0711/3/339:346T-loop with 2 stacked bulged bases
homologous
HL_4WF9_010
HL_13999.3
HL_7OOD_0111/3/361:369T-loop with unstacked turn
geometric
HL_5J7L_144
NA
HL_7OOD_0721/3/420:428No text annotation
HL_7OOD_0121/3/421:426No text annotation
HL_7OOD_0131/3/446:453Pseudoknot geometry
geometric
HL_7A0S_014
HL_30680.5
HL_7OOD_0141/3/498:503GNRA
geometric
HL_5TBW_064
NA
HL_7OOD_0151/3/523:528GNRA
geometric
HL_5J7L_152
NA
HL_7OOD_0161/3/577:584No text annotation
geometric
HL_4WF9_017
HL_50318.1
HL_7OOD_0171/3/599:608T-loop with 2 stacked bulged bases
geometric
HL_4WF9_018
HL_33597.3
HL_7OOD_0181/3/646:652GNRA related
geometric
HL_5J7L_179
NA
HL_7OOD_0191/3/665:670GNRA
geometric
HL_5J7L_152
NA
HL_7OOD_0201/3/677:683No text annotation
geometric
HL_7RQB_021
NA
HL_7OOD_0211/3/747:754GNRA wlth tandem sheared
geometric
HL_5J7L_154
NA
HL_7OOD_0221/3/779:788No text annotation
geometric
HL_4WF9_023
HL_50204.1
HL_7OOD_0231/3/813:821No text annotation
geometric
HL_5TBW_021
NA
HL_7OOD_0241/3/861:866No text annotation
geometric
HL_7RQB_025
NA
HL_7OOD_0251/3/922:928No text annotation
HL_7OOD_0261/3/991:998GNRA related
geometric
HL_5J7L_179
NA
HL_7OOD_0271/3/1014:1021No text annotation
geometric
HL_2ZNI_001
HL_75660.8
HL_7OOD_0281/3/1099:1109No text annotation
homologous
HL_5J7L_161
NA
HL_7OOD_0291/3/1127:1134GNRA wlth tandem sheared
geometric
HL_6PRV_002
HL_98423.3
HL_7OOD_0301/3/1205:1210No text annotation
HL_7OOD_0311/3/1252:1257GNRA
geometric
HL_7A0S_031
HL_34789.4
HL_7OOD_0321/3/1309:1317No text annotation
geometric
HL_7RQB_033
NA
HL_7OOD_0331/3/1352:1358Pseudoknot geometry with 3' bulge
geometric
HL_4WF9_033
HL_49081.1
HL_7OOD_0341/3/1391:1396No text annotation
geometric
HL_5U3G_001
HL_75660.8
HL_7OOD_0351/3/1417:1426No text annotation
geometric
HL_7RQB_036
NA
HL_7OOD_0361/3/1477:1488No text annotation
HL_7OOD_0371/3/1517:1523Pseudoknot geometry with 3' bulge
geometric
HL_5J7L_170
NA
HL_7OOD_0391/3/1599:1602Mini UNCG
geometric
HL_7A0S_039
HL_90436.3
HL_7OOD_0401/3/1646:1653No text annotation
geometric
HL_7RQB_040
NA
HL_7OOD_0411/3/1664:1670GNRA
geometric
HL_1XJR_001
HL_34789.4
HL_7OOD_0421/3/1725:1730UNCG
geometric
HL_4PMI_004
HL_61337.4
HL_7OOD_0431/3/1746:1753GNRA wlth tandem sheared
geometric
HL_3HHN_010
HL_98423.3
HL_7OOD_0441/3/1759:1763No text annotation
geometric
HL_5TBW_006
NA
HL_7OOD_0451/3/1784:1794No text annotation
geometric
HL_5TBW_046
NA
HL_7OOD_0461/3/1813:1818GNRA
geometric
HL_7RQB_046
NA
HL_7OOD_0471/3/1875:1880GNRA
geometric
HL_4QLM_001
HL_34789.4
HL_7OOD_0481/3/1917:1927No text annotation
geometric
HL_5TBW_049
NA
HL_7OOD_0491/3/1956:1964No text annotation
geometric
HL_7RQB_049
NA
HL_7OOD_0501/3/2034:2043No text annotation
geometric
HL_4WF9_047
HL_78372.1
HL_7OOD_0511/3/2150:2155No text annotation
homologous
HL_9DFE_049
NA
HL_7OOD_0521/3/2217:2223No text annotation
geometric
HL_5J7L_185
NA
HL_7OOD_0531/3/2256:2264No text annotation
geometric
HL_7A0S_052
HL_11974.2
HL_7OOD_0541/3/2272:2284No text annotation
geometric
HL_4WF9_050
HL_02042.1
HL_7OOD_0551/3/2311:2321No text annotation
geometric
HL_5J7L_188
NA
HL_7OOD_0561/3/2332:2339Pseudoknot geometry
geometric
HL_7RQB_056
NA
HL_7OOD_0571/3/2363:2370GNRA with extra cWW
geometric
HL_4WF9_053
HL_87268.2
HL_7OOD_0581/3/2382:2387GNRA
geometric
HL_4V9F_020
HL_34789.4
HL_7OOD_0591/3/2412:2421No text annotation
geometric
HL_7RQB_059
NA
HL_7OOD_0601/3/2479:2487No text annotation
geometric
HL_4WF9_056
HL_52011.1
HL_7OOD_0611/3/2536:2543GNRA variation
geometric
HL_5J7L_194
NA
HL_7OOD_0621/3/2559:2565No text annotation
geometric
HL_5TBW_063
NA
HL_7OOD_0631/3/2602:2607GNRA
geometric
HL_3IGI_003
HL_34789.4
HL_7OOD_0641/3/2666:2671GNRA
geometric
HL_7A0S_068
HL_34789.4
HL_7OOD_0651/3/2709:2714Ribsomal LSU H95
geometric
HL_4WF9_061
HL_12125.2
HL_7OOD_0661/3/2753:2767No text annotation
geometric
HL_4V9F_068
HL_53269.2
HL_7OOD_0671/3/2823:2831No text annotation
geometric
HL_5J7L_201
NA
HL_7OOD_0681/3/2860:2865GNRA
geometric
HL_7A0S_068
HL_34789.4
HL_7OOD_0691/4/36:42No text annotation
geometric
HL_5NFV_001
HL_69752.4

Problematic loops

#loop idProblemSequence
HL_7OOD_010No text annotation
HL_7OOD_038No text annotation
HL_7OOD_070No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_7OOD_0011/3/20:22,
1/3/555:557		Isolated non-canonical cWW pair
geometric
IL_7A0S_107
IL_71625.3
IL_7OOD_0021/3/26:32,
1/3/545:551		Triple sheared with non-canonical cWW
geometric
IL_4WF9_001
IL_22311.1
IL_7OOD_0031/3/38:39,
1/3/478:480		Single bulged A
geometric
IL_7RQB_002
NA
IL_7OOD_0041/3/45:46,
1/3/470:472		Minor groove platform
geometric
IL_5J7L_247
NA
IL_7OOD_0051/3/83:87,
1/3/99:106		Kink-turn
geometric
IL_5J7L_035
NA
IL_7OOD_0061/3/187:188,
1/3/216:218		Single stack bend
geometric
IL_7A0S_005
IL_15011.3
IL_7OOD_0071/3/192:198,
1/3/205:212		8x7 Sarcin-Ricin; G-bulge
geometric
IL_4V9F_006
IL_62167.3
IL_7OOD_0081/3/243:249,
1/3/257:262		7x6 Sarcin-Ricin; G-bulge
geometric
IL_7RQB_007
NA
IL_7OOD_0091/3/302:303,
1/3/401:404		Multiple bulged bases
geometric
IL_4YAZ_008
IL_71421.3
IL_7OOD_0101/3/307:314,
1/3/393:397		No text annotation
IL_7OOD_1131/3/307:318,
1/3/390:397		No text annotation
IL_7OOD_0111/3/314:318,
1/3/390:393		Tandem non-canonical cWW pairs
geometric
IL_5C5W_003
NA
IL_7OOD_0121/3/327:329,
1/3/377:381		No text annotation
geometric
IL_5J7L_254
NA
IL_7OOD_0131/3/420:421,
1/3/426:428		Minor groove platform
geometric
IL_4V88_454
NA
IL_7OOD_0141/3/571:574,
1/3/587:590		Double sheared
geometric
IL_5J7L_256
NA
IL_7OOD_0151/3/640:644,
1/3/654:658		AAA cross-strand stack
geometric
IL_7RQB_016
NA
IL_7OOD_0161/3/707:709,
1/3/841:843		No text annotation
geometric
IL_7RQB_017
NA
IL_7OOD_0171/3/709:713,
1/3/834:841		tHW-tHW cross-strand stack
geometric
IL_5J7L_260
NA
IL_7OOD_0181/3/732:733,
1/3/798:800		Single bulged A
geometric
IL_5J7L_261
NA
IL_7OOD_0191/3/737:738,
1/3/763:765		Single bulged G
geometric
IL_4V9F_026
IL_28408.2
IL_7OOD_0201/3/738:742,
1/3/759:763		Triple sheared
geometric
IL_7RQB_021
NA
IL_7OOD_0211/3/773:775,
1/3/792:793		Major groove platform
geometric
IL_5J7L_264
NA
IL_7OOD_0221/3/776:778,
1/3/789:791		Isolated non-canonical cWW pair
geometric
IL_7A0S_020
IL_01003.4
IL_7OOD_0231/3/810:812,
1/3/822:826		Multiple bulged bases
geometric
IL_4V9F_030
IL_57881.1
IL_7OOD_0241/3/872:873,
1/3/976:978		Single stack bend
geometric
IL_7RQB_024
NA
IL_7OOD_0251/3/878:883,
1/3/967:971		No text annotation
IL_7OOD_0261/3/892:899,
1/3/950:958		No text annotation
IL_7OOD_0271/3/900:905,
1/3/946:949		C-loop
geometric
IL_4WF9_033
IL_16301.1
IL_7OOD_0281/3/907:909,
1/3/942:944		Isolated near basepair
geometric
IL_3NJ7_003
IL_42997.5
IL_7OOD_0291/3/913:917,
1/3/934:938		Double sheared with non-canonical cWW
geometric
IL_4WFL_001
IL_87767.2
IL_7OOD_0301/3/917:920,
1/3/930:934		No text annotation
IL_7OOD_0311/3/1030:1032,
1/3/1194:1195		Single bulged U
geometric
IL_7KVT_002
IL_97561.5
IL_7OOD_0321/3/1034:1038,
1/3/1188:1192		UAA/GAN
geometric
IL_4WF9_036
IL_08938.1
IL_7OOD_0331/3/1040:1047,
1/3/1185:1186		SSU/LSU pseudoknot
geometric
IL_4WF9_037
IL_11411.1
IL_7OOD_0341/3/1053:1059,
1/3/1175:1179		Kink-turn related
geometric
IL_5J7L_280
NA
IL_7OOD_0351/3/1059:1065,
1/3/1159:1175		No text annotation
geometric
IL_5J7L_281
NA
IL_7OOD_0361/3/1066:1069,
1/3/1156:1158		Isolated non-canonical cWW pair
geometric
IL_7RQB_041
NA
IL_7OOD_1251/3/1078:1086,
1/3/1143:1147		Kink-turn
homologous
IL_5J7L_284
NA
IL_7OOD_0381/3/1094:1097,
1/3/1111:1114		No text annotation
geometric
IL_5J7L_285
NA
IL_7OOD_0391/3/1122:1126,
1/3/1135:1137		Major groove platform with extra cWW
geometric
IL_1MMS_002
NA
IL_7OOD_0401/3/1227:1229,
1/3/1277:1280		Isolated cWS basepair
geometric
IL_7A0S_041
IL_42997.5
IL_7OOD_0411/3/1238:1245,
1/3/1264:1268		Kink-turn
geometric
IL_4V9F_048
IL_90775.2
IL_7OOD_0421/3/1249:1251,
1/3/1258:1260		Intercalated cWW
geometric
IL_4WF9_047
IL_53541.1
IL_7OOD_0431/3/1338:1341,
1/3/1637:1638		Major groove platform; stack outside cWW
geometric
IL_4V88_428
NA
IL_7OOD_0441/3/1347:1351,
1/3/1359:1361		Major groove minor groove platform with tHH
geometric
IL_4WF9_050
IL_06671.1
IL_7OOD_0451/3/1379:1381,
1/3/1407:1408		Single stack bend
geometric
IL_7A0S_005
IL_15011.3
IL_7OOD_1171/3/1379:1383,
1/3/1404:1408		UAA/GAN
homologous
IL_5J7L_292
NA
IL_7OOD_0461/3/1381:1383,
1/3/1404:1407		No text annotation
IL_7OOD_0471/3/1385:1389,
1/3/1398:1402		tSH-tHW-tHS
geometric
IL_4WF9_052
IL_05821.1
IL_7OOD_0481/3/1443:1444,
1/3/1615:1621		180 degree turn
geometric
IL_5TBW_036
NA
IL_7OOD_1181/3/1445:1449,
1/3/1611:1614		Other IL
homologous
IL_4WF9_054
IL_74317.1
IL_7OOD_0501/3/1460:1463,
1/3/1591:1595		Tandem non-canonical cWW pairs
geometric
IL_5J7L_296
NA
IL_7OOD_1191/3/1466:1469,
1/3/1583:1588		No text annotation
IL_7OOD_0521/3/1494:1497,
1/3/1546:1550		No text annotation
geometric
IL_5J7L_299
NA
IL_7OOD_1261/3/1501:1504,
1/3/1539:1542		Double sheared
geometric
IL_5BTP_004
IL_58355.2
IL_7OOD_0541/3/1507:1510,
1/3/1529:1536		No text annotation
IL_7OOD_1271/3/1514:1516,
1/3/1524:1525		Single bulged A
homologous
IL_9DFE_061
IL_14190.2
IL_7OOD_0561/3/1552:1555,
1/3/1575:1579		UAA/GAN variation
geometric
IL_5J7L_303
NA
IL_7OOD_0571/3/1685:1690,
1/3/2011:2013		No text annotation
geometric
IL_7RQB_064
NA
IL_7OOD_0581/3/1697:1699,
1/3/2002:2004		Isolated tWW turn
geometric
IL_5TBW_075
NA
IL_7OOD_0591/3/1700:1703,
1/3/2000:2001		Major groove platform; stack outside cWW
geometric
IL_5TBW_076
NA
IL_7OOD_1201/3/1700:1708,
1/3/1997:2001		No text annotation
homologous
IL_7A0S_109
IL_80252.1
IL_7OOD_0601/3/1703:1708,
1/3/1997:2000		Intercalated tWH
geometric
IL_7A0S_062
IL_28217.1
IL_7OOD_0611/3/1720:1725,
1/3/1730:1736		tSH-tSH-tHH-tHS
geometric
IL_7RQB_068
NA
IL_7OOD_0621/3/1777:1778,
1/3/1987:1989		Single bulged A
geometric
IL_5J7L_312
NA
IL_7OOD_0631/3/1805:1811,
1/3/1820:1828		Kink-turn related
geometric
IL_7RQB_070
NA
IL_7OOD_0641/3/1844:1847,
1/3/1909:1910		Major groove intercalation
geometric
IL_5TBW_084
NA
IL_7OOD_0651/3/1848:1849,
1/3/1905:1908		Major groove intercalation
geometric
IL_4WF9_071
IL_71421.3
IL_7OOD_0661/3/1853:1856,
1/3/1900:1901		Major groove minor groove platform; mini C-loop
geometric
IL_5J7L_316
NA
IL_7OOD_1211/3/1858:1862,
1/3/1894:1898		UAA/GAN with extra stack
homologous
IL_9DFE_074
IL_89021.4
IL_7OOD_0681/3/1863:1867,
1/3/1889:1893		Double sheared with near cWW
geometric
IL_7A0S_056
IL_87767.2
IL_7OOD_0691/3/1871:1874,
1/3/1881:1885		UAA/GAN related
geometric
IL_5J7L_317
NA
IL_7OOD_0701/3/1940:1941,
1/3/1971:1974		Multiple bulged bases
geometric
IL_7V9E_001
NA
IL_7OOD_0711/3/1941:1952,
1/3/1968:1971		No text annotation
geometric
IL_4WF9_077
IL_84014.1
IL_7OOD_0721/3/1952:1954,
1/3/1966:1968		Isolated non-canonical cWW pair
geometric
IL_3GM7_006
IL_01003.4
IL_7OOD_0731/3/2056:2059,
1/3/2625:2627		No text annotation
geometric
IL_6DME_003
IL_75527.2
IL_7OOD_0741/3/2061:2063,
1/3/2620:2623		No text annotation
homologous
IL_5J7L_321
NA
IL_7OOD_0751/3/2074:2076,
1/3/2450:2451		Single bulged U
geometric
IL_7A0S_075
IL_97561.5
IL_7OOD_0761/3/2077:2078,
1/3/2446:2449		Minor groove platform
geometric
IL_7RQB_081
NA
IL_7OOD_1231/3/2088:2090,
1/3/2244:2247		Isolated tHS basepair with bulges
homologous
IL_7A0S_077
IL_87316.2
IL_7OOD_0781/3/2101:2103,
1/3/2201:2203		Isolated non-canonical cWW pair
geometric
IL_4E48_005
IL_01003.4
IL_7OOD_0791/3/2105:2107,
1/3/2197:2199		Isolated non-canonical cWW pair
geometric
IL_3IVK_002
IL_01003.4
IL_7OOD_0801/3/2109:2113,
1/3/2191:2195		No text annotation
IL_7OOD_0811/3/2115:2117,
1/3/2187:2189		Isolated non-canonical cWW pair
geometric
IL_1MZP_001
IL_68118.4
IL_7OOD_0821/3/2117:2127,
1/3/2186:2187		No text annotation
geometric
IL_1MZP_002
IL_32056.1
IL_7OOD_0831/3/2131:2134,
1/3/2168:2182		No text annotation
IL_7OOD_0841/3/2136:2143,
1/3/2162:2166		Kink-turn
geometric
IL_5J7L_330
NA
IL_7OOD_0851/3/2210:2213,
1/3/2227:2229		Isolated non-canonical cWW pair
geometric
IL_4V88_426
NA
IL_7OOD_0861/3/2305:2307,
1/3/2325:2329		No text annotation
homologous
IL_8VTW_087
NA
IL_7OOD_0871/3/2358:2361,
1/3/2372:2375		Double sheared
geometric
IL_1SAQ_002
NA
IL_7OOD_0881/3/2409:2411,
1/3/2422:2423		Single bulged C
geometric
IL_3HHN_003
IL_05642.3
IL_7OOD_0891/3/2461:2462,
1/3/2506:2508		Single stack bend
geometric
IL_4WF9_089
IL_15011.3
IL_7OOD_0901/3/2462:2463,
1/3/2504:2506		Major groove platform
geometric
IL_7RQB_092
NA
IL_7OOD_0911/3/2465:2467,
1/3/2501:2502		Major groove platform
geometric
IL_7A0S_085
IL_48076.8
IL_7OOD_0921/3/2467:2469,
1/3/2497:2501		Major groove minor groove platform with extra cWW
geometric
IL_7A0S_086
IL_36931.2
IL_7OOD_0931/3/2474:2478,
1/3/2488:2492		Double sheared with non-canonical cWW
geometric
IL_4WF9_093
IL_87767.2
IL_7OOD_0941/3/2515:2516,
1/3/2588:2590		Major groove platform
geometric
IL_5TBW_107
NA
IL_7OOD_0951/3/2518:2520,
1/3/2582:2586		Isolated non-canonical cWW with bulges
geometric
IL_5TBW_108
NA
IL_7OOD_0961/3/2520:2521,
1/3/2579:2582		Multiple bulged bases
geometric
IL_7RQB_098
NA
IL_7OOD_0971/3/2530:2531,
1/3/2548:2551		Major groove platform with intercalation
geometric
IL_5J7L_342
NA
IL_7OOD_0981/3/2599:2600,
1/3/2609:2611		Single bulged A
geometric
IL_1U9S_001
IL_14190.2
IL_7OOD_0991/3/2644:2649,
1/3/2781:2790		No text annotation
IL_7OOD_1001/3/2660:2666,
1/3/2671:2676		Sarcin-Ricin target in LSU H95; G-bulge
geometric
IL_7A0S_094
IL_16458.6
IL_7OOD_1011/3/2688:2692,
1/3/2733:2735		C-loop
geometric
IL_7RQB_104
NA
IL_7OOD_1021/3/2695:2699,
1/3/2726:2730		UAA/GAN related, with intercalation
geometric
IL_4WF9_102
IL_82016.1
IL_7OOD_1031/3/2703:2704,
1/3/2719:2722		Multiple bulged bases
geometric
IL_4WF9_103
IL_44609.2
IL_7OOD_1041/3/2745:2750,
1/3/2770:2775		UAA/GAN with extra cWW
geometric
IL_5J7L_350
NA
IL_7OOD_1051/3/2842:2843,
1/3/2882:2884		Major groove intercalation
geometric
IL_5J7L_352
NA
IL_7OOD_1061/3/2847:2849,
1/3/2875:2878		No text annotation
geometric
IL_4WF9_107
IL_05502.1
IL_7OOD_1071/3/2851:2856,
1/3/2869:2873		tHS double platform
geometric
IL_7RQB_110
NA
IL_7OOD_1081/4/15:16,
1/4/63:65		Major groove intercalation
homologous
IL_5J7L_355
NA
IL_7OOD_1091/4/21:27,
1/4/53:58		No text annotation
geometric
IL_9E6Q_106
IL_41504.1
IL_7OOD_1101/4/28:29,
1/4/49:52		Major groove minor groove platform; mini C-loop
homologous
IL_7RQB_113
NA
IL_7OOD_1111/4/32:36,
1/4/42:46		Symmetric double minor groove platform
homologous
IL_4V9F_104
IL_58103.12
IL_7OOD_1121/4/69:77,
1/4/87:95		Bacterial 5S Loop E
homologous
IL_7RQB_115
NA

Problematic loops

#loop idProblemSequence
IL_7OOD_114No text annotation
IL_7OOD_037No text annotation
IL_7OOD_115No text annotation
IL_7OOD_116No text annotation
IL_7OOD_049No text annotation
IL_7OOD_051No text annotation
IL_7OOD_053Double sheared with non-canonical cWW
IL_7OOD_055Isolated non-canonical cWW with bulges
IL_7OOD_067No text annotation
IL_7OOD_122No text annotation
IL_7OOD_077No text annotation
IL_7OOD_124No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
J3_7OOD_0161/3/32:33,
1/3/510:520,
1/3/531:545		No text annotation
homologous
J3_9DFE_002
J3_17917.1
J3_7OOD_0171/3/34:37,
1/3/481:497,
1/3/504:509		No text annotation
homologous
J3_5J7L_067
NA
J3_7OOD_0011/3/58:59,
1/3/72:78,
1/3/111:115		No text annotation
homologous
J3_5J7L_037
NA
J3_7OOD_0021/3/273:277,
1/3/292:299,
1/3/407:408		No text annotation
homologous
J3_4WF9_022
J3_97971.2
J3_7OOD_0181/3/331:335,
1/3/350:359,
1/3/371:375		No text annotation
homologous
J3_5J7L_068
NA
J3_7OOD_0031/3/718:724,
1/3/808:810,
1/3/826:829		No text annotation
homologous
J3_8VTW_001
NA
J3_7OOD_0041/3/733:735,
1/3/767:771,
1/3/795:798		No text annotation
homologous
J3_8VTW_002
NA
J3_7OOD_0051/3/1090:1092,
1/3/1116:1122,
1/3/1137:1139		No text annotation
homologous
J3_8VTW_003
NA
J3_7OOD_0061/3/1326:1331,
1/3/1659:1661,
1/3/1673:1676		No text annotation
homologous
J3_8VTW_004
NA
J3_7OOD_0191/3/1334:1337,
1/3/1639:1645,
1/3/1654:1656		No text annotation
geometric
J3_5TBW_009
NA
J3_7OOD_0081/3/1372:1378,
1/3/1409:1413,
1/3/1430:1431		No text annotation
homologous
J3_7A0S_018
J3_94309.1
J3_7OOD_0231/3/1453:1457,
1/3/1598:1599,
1/3/1602:1607		No text annotation
geometric
J3_4V9F_017
J3_08594.1
J3_7OOD_0101/3/2098:2100,
1/3/2204:2208,
1/3/2231:2236		No text annotation
homologous
J3_8VTW_006
NA
J3_7OOD_0201/3/2290:2292,
1/3/2392:2403,
1/3/2429:2435		No text annotation
homologous
J3_5J7L_070
NA
J3_7OOD_0111/3/2303:2305,
1/3/2329:2332,
1/3/2339:2345		No text annotation
J3_7OOD_0211/3/2303:2307,
1/3/2325:2332,
1/3/2339:2345		No text annotation
J3_7OOD_0121/3/2525:2528,
1/3/2553:2555,
1/3/2569:2575		No text annotation
homologous
J3_8VTW_008
NA
J3_7OOD_0131/3/2797:2801,
1/3/2808:2815,
1/3/2893:2897		No text annotation
J3_7OOD_0141/3/2818:2819,
1/3/2835:2840,
1/3/2886:2890		No text annotation
homologous
J3_4WF9_021
J3_76911.2
J3_7OOD_0151/4/8:14,
1/4/66:68,
1/4/96:100		No text annotation
homologous
J3_5J7L_049
NA
J4_7OOD_0111/3/272:273,
1/3/408:413,
1/3/435:442,
1/3/457:460		No text annotation
homologous
J4_7A0S_001
J4_94698.1
J4_7OOD_0021/3/634:639,
1/3/659:664,
1/3/671:674,
1/3/686:691		No text annotation
J4_7OOD_0031/3/1300:1304,
1/3/1322:1323,
1/3/1679:1682,
1/3/2016:2017		No text annotation
homologous
J4_4WF9_004
J4_64571.6
J4_7OOD_0041/3/1338:1342,
1/3/1366:1371,
1/3/1432:1433,
1/3/1631:1638		No text annotation
homologous
J4_4WF9_005
J4_77353.1
J4_7OOD_0051/3/1341:1342,
1/3/1366:1371,
1/3/1432:1433,
1/3/1631:1637		No text annotation
homologous
J4_4WF9_006
J4_48150.1
J4_7OOD_0121/3/1472:1473,
1/3/1492:1493,
1/3/1551:1552,
1/3/1579:1580		No text annotation
homologous
J4_5J7L_024
NA
J4_7OOD_0061/3/1472:1473,
1/3/1492:1494,
1/3/1550:1552,
1/3/1579:1580		No text annotation
J4_7OOD_0071/3/1779:1783,
1/3/1795:1799,
1/3/1834:1837,
1/3/1982:1986		No text annotation
homologous
J4_5J7L_025
NA
J4_7OOD_0081/3/1840:1842,
1/3/1912:1913,
1/3/1931:1940,
1/3/1974:1979		No text annotation
homologous
J4_9DFE_008
J4_42306.1
J4_7OOD_0091/3/2293:2297,
1/3/2351:2355,
1/3/2378:2380,
1/3/2389:2391		No text annotation
homologous
J4_5J7L_027
NA
J4_7OOD_0101/3/2651:2654,
1/3/2682:2683,
1/3/2740:2743,
1/3/2777:2779		No text annotation
J5_7OOD_0071/3/49:56,
1/3/117:122,
1/3/131:132,
1/3/151:153,
1/3/179:181		No text annotation
homologous
J5_4WF9_001
J5_27223.1
J5_7OOD_0021/3/566:568,
1/3/593:597,
1/3/610:612,
1/3/1291:1299,
1/3/2018:2025		No text annotation
J5_7OOD_0031/3/617:622,
1/3/703:706,
1/3/844:847,
1/3/1226:1227,
1/3/1280:1286		No text annotation
homologous
J5_4WF9_004
J5_74302.6
J5_7OOD_0041/3/1708:1716,
1/3/1740:1741,
1/3/1758:1759,
1/3/1763:1771,
1/3/1995:1997		No text annotation
homologous
J5_7A0S_005
J5_99177.1
J5_7OOD_0051/3/2064:2071,
1/3/2454:2461,
1/3/2508:2515,
1/3/2590:2596,
1/3/2614:2619		No text annotation
J5_7OOD_0061/3/2081:2084,
1/3/2251:2254,
1/3/2266:2267,
1/3/2289:2290,
1/3/2435:2443		No text annotation
homologous
J5_4WF9_007
J5_39529.2
J6_7OOD_0011/3/47:48,
1/3/182:187,
1/3/218:228,
1/3/235:239,
1/3/266:270,
1/3/462:469		No text annotation
J7_7OOD_0031/3/10:17,
1/3/560:566,
1/3/2025:2030,
1/3/2047:2050,
1/3/2633:2638,
1/3/2796:2797,
1/3/2897:2898		No text annotation
J7_7OOD_0021/3/852:857,
1/3/870:871,
1/3/979:982,
1/3/1007:1012,
1/3/1023:1027,
1/3/1198:1199,
1/3/1216:1221		No text annotation

Problematic loops

#loop idProblemSequence
J3_7OOD_007No text annotation
J3_7OOD_009No text annotation
J3_7OOD_022No text annotation
J4_7OOD_001No text annotation
J5_7OOD_001No text annotation
J7_7OOD_001No text annotation

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