HL_7OPE_010

3D structure

PDB id

7OPE (explore in PDB, NAKB, or RNA 3D Hub)

Description

RqcH DR variant bound to 50S-peptidyl-tRNA-RqcP RQC complex (rigid body refinement)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CAAAUG

Length

6 nucleotides

Bulged bases

7OPE|1|A|U|232

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OPE_010 not in the Motif Atlas

Homologous match to HL_4WF9_007

Geometric discrepancy: 0.1613

The information below is about HL_4WF9_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_51020.2

Basepair signature

cWW-cSW-F

Number of instances in this motif group

14

Unit IDs

7OPE|1|A|C|228
7OPE|1|A|A|229
7OPE|1|A|A|230
7OPE|1|A|A|231
7OPE|1|A|U|232
7OPE|1|A|G|233

Current chains

Chain A

23S rRNA

Nearby chains

Chain P

50S ribosomal protein L15