HL_7OPE_062
3D structure
- PDB id
- 7OPE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- RqcH DR variant bound to 50S-peptidyl-tRNA-RqcP RQC complex (rigid body refinement)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UGUAGUCG
- Length
- 8 nucleotides
- Bulged bases
- 7OPE|1|A|G|2558
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OPE_062 not in the Motif Atlas
- Homologous match to HL_4WF9_057
- Geometric discrepancy: 0.1398
- The information below is about HL_4WF9_057
- Detailed Annotation
- GNRA variation
- Broad Annotation
- GNRA variation
- Motif group
- HL_46665.2
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
7OPE|1|A|U|2557
7OPE|1|A|G|2558
7OPE|1|A|U|2559
7OPE|1|A|A|2560
7OPE|1|A|G|2561
7OPE|1|A|U|2562
7OPE|1|A|C|2563
7OPE|1|A|G|2564
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 0
- Rqc2 homolog RqcH
- Chain I
- 50S ribosomal protein L6
- Chain j
- 50S ribosomal protein L36
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