HL_7OSA_010

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CCAAGG

Length

6 nucleotides

Bulged bases

7OSA|1|18S|A|416

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OSA_010 not in the Motif Atlas

Homologous match to HL_8P9A_200

Geometric discrepancy: 0.1369

The information below is about HL_8P9A_200

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.3

Basepair signature

cWW-tSW-F

Number of instances in this motif group

62

Unit IDs

7OSA|1|18S|C|414
7OSA|1|18S|C|415
7OSA|1|18S|A|416
7OSA|1|18S|A|417
7OSA|1|18S|G|418
7OSA|1|18S|G|419

Current chains

Chain 18S

18S rRNA

Nearby chains

Chain eEF2

Elongation factor 2

Chain eS6

40S ribosomal protein S6

Chain uL14

60S ribosomal protein L23-B