HL_7OSA_011

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UAAUUCA

Length

7 nucleotides

Bulged bases

7OSA|1|18S|U|454, 7OSA|1|18S|C|455

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OSA_011 not in the Motif Atlas

Homologous match to HL_8P9A_201

Geometric discrepancy: 0.1214

The information below is about HL_8P9A_201

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48417.5

Basepair signature

cWW-F-F

Number of instances in this motif group

26

Unit IDs

7OSA|1|18S|U|450
7OSA|1|18S|A|451
7OSA|1|18S|A|452
7OSA|1|18S|U|453
7OSA|1|18S|U|454
7OSA|1|18S|C|455
7OSA|1|18S|A|456

Current chains

Chain 18S

18S rRNA

Nearby chains

Chain eS24

40S ribosomal protein S24

Chain eS4

40S ribosomal protein S4