HL_7OSA_021

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OSA_021 not in the Motif Atlas

Homologous match to HL_8C3A_212

Geometric discrepancy: 0.0666

The information below is about HL_8C3A_212

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.5

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

302

Unit IDs

7OSA|1|18S|C|937
7OSA|1|18S|G|938
7OSA|1|18S|A|939
7OSA|1|18S|A|940
7OSA|1|18S|A|941
7OSA|1|18S|G|942

Current chains

Chain 18S

18S rRNA

Nearby chains

Chain eS26

40S ribosomal protein S26

Chain uS15

40S ribosomal protein S13