HL_7OSA_025

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CGCAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OSA_025 not in the Motif Atlas

Homologous match to HL_8P9A_214

Geometric discrepancy: 0.1035

The information below is about HL_8P9A_214

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.3

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

397

Unit IDs

7OSA|1|18S|C|1121
7OSA|1|18S|G|1122
7OSA|1|18S|C|1123
7OSA|1|18S|A|1124
7OSA|1|18S|A|1125
7OSA|1|18S|G|1126

Current chains

Chain 18S

18S rRNA

Nearby chains

Chain 25S

Large subunit ribosomal RNA; LSU rRNA

Chain eL41

eL41

Chain eL43

60S ribosomal protein L43-A