HL_7OSA_030

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CAUUUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OSA_030 not in the Motif Atlas

Homologous match to HL_8C3A_221

Geometric discrepancy: 0.2134

The information below is about HL_8C3A_221

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48417.3

Basepair signature

cWW-F-F

Number of instances in this motif group

23

Unit IDs

7OSA|1|18S|C|1359
7OSA|1|18S|A|1360
7OSA|1|18S|U|1361
7OSA|1|18S|U|1362
7OSA|1|18S|U|1363
7OSA|1|18S|G|1364

Current chains

Chain 18S

18S rRNA

Nearby chains

Chain eS19

40S ribosomal protein S19-A

Chain uS7

Rps5p

Chain uS9

BJ4_G0008010.mRNA.1.CDS.1