HL_7OSA_031

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UUUCAAG

Length

7 nucleotides

Bulged bases

7OSA|1|18S|U|1398

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OSA_031 not in the Motif Atlas

Geometric match to HL_6YMC_001

Geometric discrepancy: 0.2843

The information below is about HL_6YMC_001

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

7OSA|1|18S|U|1396
7OSA|1|18S|U|1397
7OSA|1|18S|U|1398
7OSA|1|18S|C|1399
7OSA|1|18S|A|1400
7OSA|1|18S|A|1401
7OSA|1|18S|G|1402

Current chains

Chain 18S

18S rRNA

Nearby chains

Chain eS17

BJ4_G0020710.mRNA.1.CDS.1