HL_7OSA_071

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GUUAAGAUUC

Length

10 nucleotides

Bulged bases

7OSA|1|25S|U|1606, 7OSA|1|25S|U|1607

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OSA_071 not in the Motif Atlas

Homologous match to HL_8C3A_035

Geometric discrepancy: 0.1254

The information below is about HL_8C3A_035

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_35087.1

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7OSA|1|25S|G|1599
7OSA|1|25S|U|1600
7OSA|1|25S|U|1601
7OSA|1|25S|A|1602
7OSA|1|25S|A|1603
7OSA|1|25S|G|1604
7OSA|1|25S|A|1605
7OSA|1|25S|U|1606
7OSA|1|25S|U|1607
7OSA|1|25S|C|1608

Current chains

Chain 25S

25S rRNA

Nearby chains

Chain eL19

60S ribosomal protein L19-A

Chain eL34

60S ribosomal protein L34-A

Chain uL23

60S ribosomal protein L25