3D structure

PDB id
7OSA (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
GUUAAGAUUC
Length
10 nucleotides
Bulged bases
7OSA|1|25S|U|1606, 7OSA|1|25S|U|1607
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7OSA_071 not in the Motif Atlas
Homologous match to HL_8C3A_035
Geometric discrepancy: 0.1254
The information below is about HL_8C3A_035
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_35087.1
Basepair signature
cWW-tWH-F-F-F-F
Number of instances in this motif group
7

Unit IDs

7OSA|1|25S|G|1599
7OSA|1|25S|U|1600
7OSA|1|25S|U|1601
7OSA|1|25S|A|1602
7OSA|1|25S|A|1603
7OSA|1|25S|G|1604
7OSA|1|25S|A|1605
7OSA|1|25S|U|1606
7OSA|1|25S|U|1607
7OSA|1|25S|C|1608

Current chains

Chain 25S
25S rRNA

Nearby chains

Chain eL19
60S ribosomal protein L19-A
Chain eL34
60S ribosomal protein L34-A
Chain uL23
60S ribosomal protein L25

Coloring options:


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