HL_7OSA_076

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CCGUG

Length

5 nucleotides

Bulged bases

7OSA|1|25S|C|1793

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OSA_076 not in the Motif Atlas

Homologous match to HL_8P9A_151

Geometric discrepancy: 0.0904

The information below is about HL_8P9A_151

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.3

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

7OSA|1|25S|C|1792
7OSA|1|25S|C|1793
7OSA|1|25S|G|1794
7OSA|1|25S|U|1795
7OSA|1|25S|G|1796

Current chains

Chain 25S

25S rRNA

Nearby chains

Chain eL43

60S ribosomal protein L43-A

Chain uL2

60S ribosomal protein L2-B