HL_7OSA_091

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CUGGGGCGG

Length

9 nucleotides

Bulged bases

7OSA|1|25S|G|2618

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OSA_091 not in the Motif Atlas

Homologous match to HL_8P9A_165

Geometric discrepancy: 0.0663

The information below is about HL_8P9A_165

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_85367.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

11

Unit IDs

7OSA|1|25S|C|2616
7OSA|1|25S|U|2617
7OSA|1|25S|G|2618
7OSA|1|25S|G|2619
7OSA|1|25S|G|2620
7OSA|1|25S|G|2621
7OSA|1|25S|C|2622
7OSA|1|25S|G|2623
7OSA|1|25S|G|2624

Current chains

Chain 25S

25S rRNA

Nearby chains

Chain eL29

60S ribosomal protein L29

Chain uL16

60S ribosomal protein L10