HL_7OSA_094
3D structure
- PDB id
- 7OSA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CAAAAGGG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OSA_094 not in the Motif Atlas
- Homologous match to HL_8P9A_168
- Geometric discrepancy: 0.1058
- The information below is about HL_8P9A_168
- Detailed Annotation
- Pseudoknot geometry
- Broad Annotation
- No text annotation
- Motif group
- HL_93324.4
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 24
Unit IDs
7OSA|1|25S|C|2693
7OSA|1|25S|A|2694
7OSA|1|25S|A|2695
7OSA|1|25S|A|2696
7OSA|1|25S|A|2697
7OSA|1|25S|G|2698
7OSA|1|25S|G|2699
7OSA|1|25S|G|2700
Current chains
- Chain 25S
- 25S rRNA
Nearby chains
- Chain eL21
- BJ4_G0003770.mRNA.1.CDS.1
- Chain eL42
- BJ4_G0001880.mRNA.1.CDS.1
- Chain uL16
- 60S ribosomal protein L10
- Chain uL5
- BJ4_G0027750.mRNA.1.CDS.1
Coloring options: