HL_7OSA_106

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CGGAAAGG

Length

8 nucleotides

Bulged bases

7OSA|1|25S|A|3243, 7OSA|1|25S|A|3244

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OSA_106 not in the Motif Atlas

Homologous match to HL_8P9A_180

Geometric discrepancy: 0.0764

The information below is about HL_8P9A_180

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_07886.3

Basepair signature

cWW-F-F-F

Number of instances in this motif group

6

Unit IDs

7OSA|1|25S|C|3240
7OSA|1|25S|G|3241
7OSA|1|25S|G|3242
7OSA|1|25S|A|3243
7OSA|1|25S|A|3244
7OSA|1|25S|A|3245
7OSA|1|25S|G|3246
7OSA|1|25S|G|3247

Current chains

Chain 25S

25S rRNA

Nearby chains

Chain uL13

60S ribosomal protein L16-A

Chain uL3

60S ribosomal protein L3