HL_7OSA_107

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GUAUACGAC

Length

9 nucleotides

Bulged bases

7OSA|1|25S|U|3304

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OSA_107 not in the Motif Atlas

Homologous match to HL_8P9A_181

Geometric discrepancy: 0.0614

The information below is about HL_8P9A_181

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64690.6

Basepair signature

cWW-cSW-F-F-F-F

Number of instances in this motif group

9

Unit IDs

7OSA|1|25S|G|3303
7OSA|1|25S|U|3304
7OSA|1|25S|A|3305
7OSA|1|25S|U|3306
7OSA|1|25S|A|3307
7OSA|1|25S|C|3308
7OSA|1|25S|G|3309
7OSA|1|25S|A|3310
7OSA|1|25S|C|3311

Current chains

Chain 25S

25S rRNA

Nearby chains

Chain eL31

BJ4_G0008090.mRNA.1.CDS.1

Chain uL22

BJ4_G0005750.mRNA.1.CDS.1

Chain uL3

60S ribosomal protein L3