HL_7OSM_010
3D structure
- PDB id
- 7OSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CCAAGG
- Length
- 6 nucleotides
- Bulged bases
- 7OSM|1|18S|A|416
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OSM_010 not in the Motif Atlas
- Homologous match to HL_4V88_196
- Geometric discrepancy: 0.1213
- The information below is about HL_4V88_196
- Detailed Annotation
- UNCG
- Broad Annotation
- No text annotation
- Motif group
- HL_34617.1
- Basepair signature
- cWW-tSW-F
- Number of instances in this motif group
- 57
Unit IDs
7OSM|1|18S|C|414
7OSM|1|18S|C|415
7OSM|1|18S|A|416
7OSM|1|18S|A|417
7OSM|1|18S|G|418
7OSM|1|18S|G|419
Current chains
- Chain 18S
- 18S rRNA
Nearby chains
- Chain eEF2
- Elongation factor 2
- Chain eS24
- 40S ribosomal protein S24
- Chain eS6
- 40S ribosomal protein S6
- Chain uL14
- 60S ribosomal protein L23-B
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