HL_7OSM_012

3D structure

PDB id

7OSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GGGCCCAUUCGGGUCU

Length

16 nucleotides

Bulged bases

7OSM|1|18S|G|488, 7OSM|1|18S|U|493, 7OSM|1|18S|C|495

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OSM|1|18S|G|486
7OSM|1|18S|G|487
7OSM|1|18S|G|488
7OSM|1|18S|C|489
7OSM|1|18S|C|490
7OSM|1|18S|C|491
7OSM|1|18S|A|492
7OSM|1|18S|U|493
7OSM|1|18S|U|494
7OSM|1|18S|C|495
7OSM|1|18S|G|496
7OSM|1|18S|G|497
7OSM|1|18S|G|498
7OSM|1|18S|U|499
7OSM|1|18S|C|500
7OSM|1|18S|U|501

Current chains

Chain 18S

18S rRNA

Nearby chains

Chain eS30

40S ribosomal protein S30