HL_7OSM_020

3D structure

PDB id

7OSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GAGGUGAAAUUC

Length

12 nucleotides

Bulged bases

7OSM|1|18S|U|903

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OSM|1|18S|G|899
7OSM|1|18S|A|900
7OSM|1|18S|G|901
7OSM|1|18S|G|902
7OSM|1|18S|U|903
7OSM|1|18S|G|904
7OSM|1|18S|A|905
7OSM|1|18S|A|906
7OSM|1|18S|A|907
7OSM|1|18S|U|908
7OSM|1|18S|U|909
7OSM|1|18S|C|910

Current chains

Chain 18S

18S rRNA

Nearby chains

Chain 25S

Large subunit ribosomal RNA; LSU rRNA

Chain PSIT

Transfer RNA; tRNA

Chain eS26

40S ribosomal protein S26

Chain uS11

40S ribosomal protein S14-A