HL_7OSM_034
3D structure
- PDB id
- 7OSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GUCAUCAGC
- Length
- 9 nucleotides
- Bulged bases
- 7OSM|1|18S|G|1601
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OSM_034 not in the Motif Atlas
- Homologous match to HL_4V88_220
- Geometric discrepancy: 0.2467
- The information below is about HL_4V88_220
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_01927.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
7OSM|1|18S|G|1594
7OSM|1|18S|U|1595
7OSM|1|18S|C|1596
7OSM|1|18S|A|1597
7OSM|1|18S|U|1598
7OSM|1|18S|C|1599
7OSM|1|18S|A|1600
7OSM|1|18S|G|1601
7OSM|1|18S|C|1602
Current chains
- Chain 18S
- 18S rRNA
Nearby chains
- Chain eS19
- 40S ribosomal protein S19-A
- Chain uS10
- 40S ribosomal protein S20
- Chain uS13
- 40S ribosomal protein S18-B
- Chain uS14
- HLJ1_G0030400.mRNA.1.CDS.1
- Chain uS3
- BJ4_G0045400.mRNA.1.CDS.1
- Chain uS9
- BJ4_G0008010.mRNA.1.CDS.1
Coloring options: