HL_7OSM_035

3D structure

PDB id

7OSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UUAGAGAAGGGGGCAACUCCAUCUCAGA

Length

28 nucleotides

Bulged bases

7OSM|1|18S|C|1700, 7OSM|1|18S|A|1701, 7OSM|1|18S|A|1702

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OSM|1|18S|U|1687
7OSM|1|18S|U|1688
7OSM|1|18S|A|1689
7OSM|1|18S|G|1690
7OSM|1|18S|A|1691
7OSM|1|18S|G|1692
7OSM|1|18S|A|1693
7OSM|1|18S|A|1694
7OSM|1|18S|G|1695
7OSM|1|18S|G|1696
7OSM|1|18S|G|1697
7OSM|1|18S|G|1698
7OSM|1|18S|G|1699
7OSM|1|18S|C|1700
7OSM|1|18S|A|1701
7OSM|1|18S|A|1702
7OSM|1|18S|C|1703
7OSM|1|18S|U|1704
7OSM|1|18S|C|1705
7OSM|1|18S|C|1706
7OSM|1|18S|A|1707
7OSM|1|18S|U|1708
7OSM|1|18S|C|1709
7OSM|1|18S|U|1710
7OSM|1|18S|C|1711
7OSM|1|18S|A|1712
7OSM|1|18S|G|1713
7OSM|1|18S|A|1714

Current chains

Chain 18S

18S rRNA

Nearby chains

Chain eS6

40S ribosomal protein S6