HL_7OSM_039
3D structure
- PDB id
- 7OSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CGGCGAG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OSM_039 not in the Motif Atlas
- Homologous match to HL_8C3A_003
- Geometric discrepancy: 0.0893
- The information below is about HL_8C3A_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_67216.9
- Basepair signature
- cWW-cWW-F-tSH
- Number of instances in this motif group
- 9
Unit IDs
7OSM|1|25S|C|90
7OSM|1|25S|G|91
7OSM|1|25S|G|92
7OSM|1|25S|C|93
7OSM|1|25S|G|94
7OSM|1|25S|A|95
7OSM|1|25S|G|96
Current chains
- Chain 25S
- 25S rRNA
Nearby chains
- Chain PSIT
- Transfer RNA; tRNA
- Chain eL13
- 60S ribosomal protein L13
- Chain eL18
- BJ4_G0033900.mRNA.1.CDS.1
- Chain eL42
- BJ4_G0001880.mRNA.1.CDS.1
- Chain uL15
- 60S ribosomal protein L28
Coloring options: