HL_7OSM_065

3D structure

PDB id

7OSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UUGAUAUGAUG

Length

11 nucleotides

Bulged bases

7OSM|1|25S|G|1349, 7OSM|1|25S|A|1350, 7OSM|1|25S|G|1354, 7OSM|1|25S|U|1356

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OSM|1|25S|U|1347
7OSM|1|25S|U|1348
7OSM|1|25S|G|1349
7OSM|1|25S|A|1350
7OSM|1|25S|U|1351
7OSM|1|25S|A|1352
7OSM|1|25S|U|1353
7OSM|1|25S|G|1354
7OSM|1|25S|A|1355
7OSM|1|25S|U|1356
7OSM|1|25S|G|1357

Current chains

Chain 25S

25S rRNA

Nearby chains

Chain eL18

BJ4_G0033900.mRNA.1.CDS.1

Chain eL6

60S ribosomal protein L6

Chain uL4

BJ4_G0008850.mRNA.1.CDS.1