HL_7OSM_070

3D structure

PDB id

7OSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GCCUGAUUUUAUGCAGGCC

Length

19 nucleotides

Bulged bases

7OSM|1|25S|U|1569

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OSM|1|25S|G|1561
7OSM|1|25S|C|1562
7OSM|1|25S|C|1563
7OSM|1|25S|U|1564
7OSM|1|25S|G|1565
7OSM|1|25S|A|1566
7OSM|1|25S|U|1567
7OSM|1|25S|U|1568
7OSM|1|25S|U|1569
7OSM|1|25S|U|1570
7OSM|1|25S|A|1571
7OSM|1|25S|U|1572
7OSM|1|25S|G|1573
7OSM|1|25S|C|1574
7OSM|1|25S|A|1575
7OSM|1|25S|G|1576
7OSM|1|25S|G|1577
7OSM|1|25S|C|1578
7OSM|1|25S|C|1579

Current chains

Chain 25S

25S rRNA

Nearby chains

Chain 58S

5.8S ribosomal RNA; 5.8S rRNA

Chain eL8

60S ribosomal protein L8-A

Chain uL2

60S ribosomal protein L2-B

Chain uL23

60S ribosomal protein L25