HL_7OSM_073

3D structure

PDB id

7OSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GUUAUCUUU

Length

9 nucleotides

Bulged bases

7OSM|1|25S|U|1687

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OSM_073 not in the Motif Atlas

Homologous match to HL_8C3A_037

Geometric discrepancy: 0.1117

The information below is about HL_8C3A_037

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_01927.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

4

Unit IDs

7OSM|1|25S|G|1680
7OSM|1|25S|U|1681
7OSM|1|25S|U|1682
7OSM|1|25S|A|1683
7OSM|1|25S|U|1684
7OSM|1|25S|C|1685
7OSM|1|25S|U|1686
7OSM|1|25S|U|1687
7OSM|1|25S|U|1688

Current chains

Chain 25S

25S rRNA

Nearby chains

Chain eL19

60S ribosomal protein L19-A

Chain eL22

60S ribosomal protein L22-A