HL_7OSM_088

3D structure

PDB id

7OSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GAGGGUAGUGGAAAUUACCUC

Length

21 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OSM|1|25S|G|2448
7OSM|1|25S|A|2449
7OSM|1|25S|G|2450
7OSM|1|25S|G|2451
7OSM|1|25S|G|2454
7OSM|1|25S|U|2455
7OSM|1|25S|A|2458
7OSM|1|25S|G|2463
7OSM|1|25S|U|2464
7OSM|1|25S|G|2465
7OSM|1|25S|G|2483
7OSM|1|25S|A|2484
7OSM|1|25S|A|2485
7OSM|1|25S|A|2486
7OSM|1|25S|U|2487
7OSM|1|25S|U|2493
7OSM|1|25S|A|2494
7OSM|1|25S|C|2495
7OSM|1|25S|C|2496
7OSM|1|25S|U|2497
7OSM|1|25S|C|2498

Current chains

Chain 25S

25S rRNA

Nearby chains

Chain PSIT

Transfer RNA; tRNA

Chain eS1

40S ribosomal protein S1