HL_7OSM_089

3D structure

PDB id

7OSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GAAUUCAUUUUC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OSM|1|25S|G|2534
7OSM|1|25S|A|2535
7OSM|1|25S|A|2536
7OSM|1|25S|U|2537
7OSM|1|25S|U|2538
7OSM|1|25S|C|2539
7OSM|1|25S|A|2540
7OSM|1|25S|U|2541
7OSM|1|25S|U|2542
7OSM|1|25S|U|2543
7OSM|1|25S|U|2544
7OSM|1|25S|C|2545

Current chains

Chain 25S

25S rRNA

Nearby chains

Chain eL8

60S ribosomal protein L8-A

Chain eS1

40S ribosomal protein S1