HL_7OSM_091

3D structure

PDB id

7OSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CUGGGGCGG

Length

9 nucleotides

Bulged bases

7OSM|1|25S|G|2618

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OSM_091 not in the Motif Atlas

Homologous match to HL_8C3A_055

Geometric discrepancy: 0.0851

The information below is about HL_8C3A_055

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_47383.2

Basepair signature

cWW-F-F-cWW-F-F

Number of instances in this motif group

11

Unit IDs

7OSM|1|25S|C|2616
7OSM|1|25S|U|2617
7OSM|1|25S|G|2618
7OSM|1|25S|G|2619
7OSM|1|25S|G|2620
7OSM|1|25S|G|2621
7OSM|1|25S|C|2622
7OSM|1|25S|G|2623
7OSM|1|25S|G|2624

Current chains

Chain 25S

25S rRNA

Nearby chains

Chain ASIT

Transfer RNA; tRNA

Chain eL29

60S ribosomal protein L29

Chain uL16

60S ribosomal protein L10