HL_7OSM_119
3D structure
- PDB id
- 7OSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GCUCAUAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OSM_119 not in the Motif Atlas
- Homologous match to HL_4TUE_034
- Geometric discrepancy: 0.1895
- The information below is about HL_4TUE_034
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.6
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 51
Unit IDs
7OSM|1|PSIT|G|32
7OSM|1|PSIT|C|33
7OSM|1|PSIT|U|34
7OSM|1|PSIT|C|35
7OSM|1|PSIT|A|36
7OSM|1|PSIT|U|37
7OSM|1|PSIT|A|38
7OSM|1|PSIT|A|39
7OSM|1|PSIT|C|40
Current chains
- Chain PSIT
- FMET tRNA
Nearby chains
- Chain 18S
- Small subunit ribosomal RNA; SSU rRNA
- Chain ASIT
- Transfer RNA; tRNA
- Chain mRNA
- MRNA
- Chain uS9
- BJ4_G0008010.mRNA.1.CDS.1
Coloring options: