HL_7OSM_125
3D structure
- PDB id
- 7OSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CGUAAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OSM_125 not in the Motif Atlas
- Homologous match to HL_8P9A_125
- Geometric discrepancy: 0.3533
- The information below is about HL_8P9A_125
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_34789.1
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 335
Unit IDs
7OSM|1|25S|C|599
7OSM|1|25S|G|600
7OSM|1|25S|U|601
7OSM|1|25S|A|602
7OSM|1|25S|A|603
7OSM|1|25S|G|604
Current chains
- Chain 25S
- 25S rRNA
Nearby chains
- Chain uL30
- 60S ribosomal protein L7-A
- Chain uL4
- BJ4_G0008850.mRNA.1.CDS.1
Coloring options: