HL_7OW7_009
3D structure
- PDB id
- 7OW7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- EIF6-bound large subunit of the human ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- GGUAAACUCC
- Length
- 10 nucleotides
- Bulged bases
- 7OW7|1|A|G|315
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OW7_009 not in the Motif Atlas
- Geometric match to HL_4QLM_002
- Geometric discrepancy: 0.2432
- The information below is about HL_4QLM_002
- Detailed Annotation
- Pseudoknot geometry
- Broad Annotation
- No text annotation
- Motif group
- HL_00911.2
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 12
Unit IDs
7OW7|1|A|G|314
7OW7|1|A|G|315
7OW7|1|A|U|316
7OW7|1|A|A|317
7OW7|1|A|A|318
7OW7|1|A|A|319
7OW7|1|A|C|320
7OW7|1|A|U|321
7OW7|1|A|C|322
7OW7|1|A|C|323
Current chains
- Chain A
- 28S rRNA
Nearby chains
- Chain U
- 60S ribosomal protein L27a
- Chain c
- 60S ribosomal protein L36
- Chain i
- 60S ribosomal protein L36a
- Chain t
- 60S ribosomal protein L15
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