HL_7OW7_014

3D structure

PDB id

7OW7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

EIF6-bound large subunit of the human ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

GUCCCC

Length

6 nucleotides

Bulged bases

7OW7|1|A|U|1179, 7OW7|1|A|C|1182

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OW7_014 not in the Motif Atlas

Geometric match to HL_4OOG_001

Geometric discrepancy: 0.1211

The information below is about HL_4OOG_001

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_12626.2

Basepair signature

cWW-F

Number of instances in this motif group

17

Unit IDs

7OW7|1|A|G|1178
7OW7|1|A|U|1179
7OW7|1|A|C|1180
7OW7|1|A|C|1181
7OW7|1|A|C|1182
7OW7|1|A|C|1183

Current chains

Chain A

28S rRNA

Nearby chains

Chain B

5S ribosomal RNA; 5S rRNA

Chain G

60S ribosomal protein L5

Chain p

60S ribosomal protein L10-like