HL_7OW7_020

3D structure

PDB id

7OW7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

EIF6-bound large subunit of the human ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

CCGCG

Length

5 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OW7_020 not in the Motif Atlas

Geometric match to HL_4V9F_041

Geometric discrepancy: 0.153

The information below is about HL_4V9F_041

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.2

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

7OW7|1|A|C|1480
7OW7|1|A|C|1481
7OW7|1|A|G|1482
7OW7|1|A|C|1483
7OW7|1|A|G|1484

Current chains

Chain A

28S rRNA

Nearby chains

Chain c

60S ribosomal protein L36

Chain r

60S ribosomal protein L13