HL_7OW7_036

3D structure

PDB id

7OW7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

EIF6-bound large subunit of the human ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

CCGCGAGG

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OW7_036 not in the Motif Atlas

Geometric match to HL_7A0S_056

Geometric discrepancy: 0.2323

The information below is about HL_7A0S_056

Detailed Annotation

GNRA with extra cWW

Broad Annotation

GNRA with extra cWW

Motif group

HL_87268.1

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7OW7|1|A|C|2560
7OW7|1|A|C|2561
7OW7|1|A|G|2562
7OW7|1|A|C|2563
7OW7|1|A|G|2564
7OW7|1|A|A|2565
7OW7|1|A|G|2566
7OW7|1|A|G|2567

Current chains

Chain A

28S rRNA

Nearby chains