HL_7OW7_050
3D structure
- PDB id
- 7OW7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- EIF6-bound large subunit of the human ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- GGGAACGGGC
- Length
- 10 nucleotides
- Bulged bases
- 7OW7|1|A|A|3876, 7OW7|1|A|A|3877, 7OW7|1|A|C|3878
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OW7_050 not in the Motif Atlas
- Homologous match to HL_8C3A_051
- Geometric discrepancy: 0.0566
- The information below is about HL_8C3A_051
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_90642.8
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
7OW7|1|A|G|3873
7OW7|1|A|G|3874
7OW7|1|A|G|3875
7OW7|1|A|A|3876
7OW7|1|A|A|3877
7OW7|1|A|C|3878
7OW7|1|A|G|3879
7OW7|1|A|G|3880
7OW7|1|A|G|3881
7OW7|1|A|C|3882
Current chains
- Chain A
- 28S rRNA
Nearby chains
- Chain E
- 60S ribosomal protein L3 isoform a
- Chain I
- 60S ribosomal protein L13a
- Chain Y
- 60S ribosomal protein L32
Coloring options: