HL_7OW7_051

3D structure

PDB id

7OW7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

EIF6-bound large subunit of the human ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

CUG(OMG)GGCGG

Length

9 nucleotides

Bulged bases

7OW7|1|A|G|4195

QA status

Modified nucleotides: OMG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OW7_051 not in the Motif Atlas

Homologous match to HL_8C3A_055

Geometric discrepancy: 0.0922

The information below is about HL_8C3A_055

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_47383.2

Basepair signature

cWW-F-F-cWW-F-F

Number of instances in this motif group

11

Unit IDs

7OW7|1|A|C|4193
7OW7|1|A|U|4194
7OW7|1|A|G|4195
7OW7|1|A|OMG|4196
7OW7|1|A|G|4197
7OW7|1|A|G|4198
7OW7|1|A|C|4199
7OW7|1|A|G|4200
7OW7|1|A|G|4201

Current chains

Chain A

28S rRNA

Nearby chains

Chain V

60S ribosomal protein L29