HL_7OW7_053

3D structure

PDB id

7OW7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

EIF6-bound large subunit of the human ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

GACAGAAAC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OW7_053 not in the Motif Atlas

Homologous match to HL_8C3A_057

Geometric discrepancy: 0.1923

The information below is about HL_8C3A_057

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_72777.1

Basepair signature

cWW-F-cWH-F-F-F-F

Number of instances in this motif group

6

Unit IDs

7OW7|1|A|G|4250
7OW7|1|A|A|4251
7OW7|1|A|C|4252
7OW7|1|A|A|4253
7OW7|1|A|G|4254
7OW7|1|A|A|4255
7OW7|1|A|A|4256
7OW7|1|A|A|4257
7OW7|1|A|C|4258

Current chains

Chain A

28S rRNA

Nearby chains

Chain q

60S ribosomal protein L11