HL_7OW7_060

3D structure

PDB id

7OW7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

EIF6-bound large subunit of the human ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

U(OMU)(OMG)(PSU)UCA

Length

7 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMU, OMG, PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OW7_060 not in the Motif Atlas

Geometric match to HL_5TBW_063

Geometric discrepancy: 0.3131

The information below is about HL_5TBW_063

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_36430.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

15

Unit IDs

7OW7|1|A|U|4497
7OW7|1|A|OMU|4498
7OW7|1|A|OMG|4499
7OW7|1|A|PSU|4500
7OW7|1|A|U|4501
7OW7|1|A|C|4502
7OW7|1|A|A|4503

Current chains

Chain A

28S rRNA

Nearby chains

Chain E

60S ribosomal protein L3 isoform a