HL_7OW7_065

3D structure

PDB id

7OW7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

EIF6-bound large subunit of the human ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

GGAGAGGC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OW7_065 not in the Motif Atlas

Geometric match to HL_2Y9H_003

Geometric discrepancy: 0.0913

The information below is about HL_2Y9H_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.7

Basepair signature

cWW-F

Number of instances in this motif group

22

Unit IDs

7OW7|1|A|G|4907
7OW7|1|A|G|4908
7OW7|1|A|A|4909
7OW7|1|A|G|4910
7OW7|1|A|A|4911
7OW7|1|A|G|4912
7OW7|1|A|G|4913
7OW7|1|A|C|4914

Current chains

Chain A

28S rRNA

Nearby chains

Chain E

60S ribosomal protein L3 isoform a

Chain I

60S ribosomal protein L13a