HL_7OW7_074

3D structure

PDB id

7OW7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

EIF6-bound large subunit of the human ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

GUUCUCUU(PSU)

Length

9 nucleotides

Bulged bases

7OW7|1|A|U|2631

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OW7_074 not in the Motif Atlas

Homologous match to HL_8C3A_037

Geometric discrepancy: 0.2928

The information below is about HL_8C3A_037

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_01927.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

4

Unit IDs

7OW7|1|A|G|2624
7OW7|1|A|U|2625
7OW7|1|A|U|2626
7OW7|1|A|C|2627
7OW7|1|A|U|2628
7OW7|1|A|C|2629
7OW7|1|A|U|2630
7OW7|1|A|U|2631
7OW7|1|A|PSU|2632

Current chains

Chain A

28S rRNA

Nearby chains

Chain L

60S ribosomal protein L19