HL_7OYD_068
3D structure
- PDB id
- 7OYD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a rabbit 80S ribosome with zebrafish Dap1b
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.3 Å
Loop
- Sequence
- GGAAACGGGCCGGAAAGGGGCCGCGCC
- Length
- 27 nucleotides
- Bulged bases
- 7OYD|1|5|C|4899, 7OYD|1|5|A|4914, 7OYD|1|5|A|4915
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7OYD|1|5|G|4894
7OYD|1|5|G|4895
7OYD|1|5|A|4896
7OYD|1|5|A|4897
7OYD|1|5|A|4898
7OYD|1|5|C|4899
7OYD|1|5|G|4900
7OYD|1|5|G|4901
7OYD|1|5|G|4908
7OYD|1|5|C|4909
7OYD|1|5|C|4910
7OYD|1|5|G|4911
7OYD|1|5|G|4912
7OYD|1|5|A|4913
7OYD|1|5|A|4914
7OYD|1|5|A|4915
7OYD|1|5|G|4916
7OYD|1|5|G|4917
7OYD|1|5|G|4919
7OYD|1|5|G|4920
7OYD|1|5|C|4921
7OYD|1|5|C|4922
7OYD|1|5|G|4923
7OYD|1|5|C|4930
7OYD|1|5|G|4931
7OYD|1|5|C|4932
7OYD|1|5|C|4933
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain B
- uL3
- Chain E
- 60S ribosomal protein L6
- Chain M
- 60S ribosomal protein L14
- Chain O
- RPL13A
Coloring options: