HL_7P3K_050

3D structure

PDB id

7P3K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 70S ribosome stalled with TnaC peptide (control)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUUAGG

Length

6 nucleotides

Bulged bases

7P3K|1|a|U|545

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7P3K_050 not in the Motif Atlas

Geometric match to HL_5TBW_044

Geometric discrepancy: 0.2018

The information below is about HL_5TBW_044

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81100.1

Basepair signature

cWW

Number of instances in this motif group

4

Unit IDs

7P3K|1|a|C|544
7P3K|1|a|U|545
7P3K|1|a|U|546
7P3K|1|a|A|547
7P3K|1|a|G|548
7P3K|1|a|G|549

Current chains

Chain a

23S rRNA

Nearby chains

Chain q

50S ribosomal protein L21