HL_7P3K_089

3D structure

PDB id

7P3K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 70S ribosome stalled with TnaC peptide (control)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UGAAUGGAAG

Length

10 nucleotides

Bulged bases

7P3K|1|a|A|2406

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7P3K_089 not in the Motif Atlas

Homologous match to HL_5J7L_192

Geometric discrepancy: 0.0762

The information below is about HL_5J7L_192

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_53454.2

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

6

Unit IDs

7P3K|1|a|U|2404
7P3K|1|a|G|2405
7P3K|1|a|A|2406
7P3K|1|a|A|2407
7P3K|1|a|U|2408
7P3K|1|a|G|2409
7P3K|1|a|G|2410
7P3K|1|a|A|2411
7P3K|1|a|A|2412
7P3K|1|a|G|2413

Current chains

Chain a

23S rRNA

Nearby chains

Chain k

50S ribosomal protein L15