HL_7P48_102
3D structure
- PDB id
- 7P48 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus ribosome in complex with Sal(B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UUCCCAUGCCGAACA
- Length
- 15 nucleotides
- Bulged bases
- 7P48|1|B|G|39
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7P48_102 not in the Motif Atlas
- Homologous match to HL_9DFE_067
- Geometric discrepancy: 0.1659
- The information below is about HL_9DFE_067
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_97756.4
- Basepair signature
- cWW-cSH-cWS-F-tSW-cSW-F-cWW-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
7P48|1|B|U|32
7P48|1|B|U|33
7P48|1|B|C|34
7P48|1|B|C|35
7P48|1|B|C|36
7P48|1|B|A|37
7P48|1|B|U|38
7P48|1|B|G|39
7P48|1|B|C|40
7P48|1|B|C|41
7P48|1|B|G|42
7P48|1|B|A|43
7P48|1|B|A|44
7P48|1|B|C|45
7P48|1|B|A|46
Current chains
- Chain B
- 5S rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain F
- 50S ribosomal protein L5
- Chain M
- 50S ribosomal protein L18
- Chain Y
- 50S ribosomal protein L31 type B
Coloring options: