HL_7P7Q_011
3D structure
- PDB id
- 7P7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- GUGAAAGCC
- Length
- 9 nucleotides
- Bulged bases
- 7P7Q|1|A|G|365, 7P7Q|1|A|A|366, 7P7Q|1|A|A|367
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7P7Q_011 not in the Motif Atlas
- Homologous match to HL_5J7L_144
- Geometric discrepancy: 0.0604
- The information below is about HL_5J7L_144
- Detailed Annotation
- T-loop with unstacked turn
- Broad Annotation
- T-loop
- Motif group
- HL_27670.2
- Basepair signature
- cWW-tWH-F-F
- Number of instances in this motif group
- 13
Unit IDs
7P7Q|1|A|G|363
7P7Q|1|A|U|364
7P7Q|1|A|G|365
7P7Q|1|A|A|366
7P7Q|1|A|A|367
7P7Q|1|A|A|368
7P7Q|1|A|G|369
7P7Q|1|A|C|370
7P7Q|1|A|C|371
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain I
- 50S ribosomal protein L4
- Chain X
- 50S ribosomal protein L24
Coloring options: