HL_7P7Q_026

3D structure

PDB id

7P7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

UGAUAAGA

Length

8 nucleotides

Bulged bases

7P7Q|1|A|U|997, 7P7Q|1|A|G|1000

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7P7Q_026 not in the Motif Atlas

Homologous match to HL_7RQB_027

Geometric discrepancy: 0.0995

The information below is about HL_7RQB_027

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_35490.2

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

299

Unit IDs

7P7Q|1|A|U|994
7P7Q|1|A|G|995
7P7Q|1|A|A|996
7P7Q|1|A|U|997
7P7Q|1|A|A|998
7P7Q|1|A|A|999
7P7Q|1|A|G|1000
7P7Q|1|A|A|1001

Current chains

Chain A

23S rRNA

Nearby chains

Chain B

5S ribosomal RNA; 5S rRNA

Chain P

50S ribosomal protein L16

Chain Y

50S ribosomal protein L27